Additional file 3 to : “ A fungal phylogeny based on 82 complete genomes using the composition vector method ”
نویسندگان
چکیده
Because our method dose not base on alignment, it is impossible to perform the samplingover-sites bootstrap or jackknife as in the standard methods. Our previous work has developed a bootstrap strategy which samples over proteins in the proteomes (see Ref. 13 in the main text for details). As a merit of this method, it can be used to test whether dropping or adding some genes will alter the tree topology. Our results show that the CVTree is quite robust to variations of gene-numbers within a considerable range (∼ 30%).
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